Indicative Publications
2017
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Lishchuk, I:
Protecting Data generated in Medical Research: Aspects of Data Protection and Intellectual Property Rights
The International Journal On Advances in Security 10 (1&2), tbd, issn: 1942-2636
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James Grogan, AJ Connor, B Markec, RJ Muschel, Philip Maini, Helen Byrne, Joe Pitt-Frances:
Microvessel Chaste: An open library for spatial modelling of vascularized tissues
Biophysical Journal 112(9), 1767–1772, DOI: 10.1016/j.bpj.2017.03.036
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Viceconti, M:
In silico assessment of biomedical products: the conundrum of rare but not so rare events in two case studies
Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine 231(5), 455 - 466, DOI: 10.1177/0954411917702931
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Brenner, J:
Mechanisms that determine nanocarrier targeting to healthy versus inflamed lung regions
Nanomedicine: Nanotechnology, Biology, and Medicine 13(4), 1495 - 1506, DOI: 10.1016/j.nano.2016.12.019
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Joe Collis, Joe Collis, Anthony J. Connor, Marcin Paczkowski, Pavitra Kannan, Joe Pitt-Francis, Helen M. Byrne, Matthew E. Hubbard:
Bayesian calibration, validation and uncertainty quantification for predictive modelling of tumour growth: a tutorial
Bulletin of Mathematical Biology 79(4), 939 - 974, DOI: 10.1007/s11538-017-0258-5
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Georgios Manikis, Nikiforaki Katerina, Ioannidis Georgios, Papanikolaou Nikolaos, Marias Kostas:
Addressing challenges in fitting bi-exponential DW-MRI data
ECR 2017–27th European Congress of Radiology March 1-5, 2017, tbd, 10.1594/ecr2017/C-2964
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Georgios Manikis, Nikiforaki Katerina, Papanikolaou Nikolaos, Matos Celco, Marias Kostas:
A versatile platform for the longitudinal analysis of the DW-MRI data
ECR 2017–27th European Congress of Radiology, March 1-5, 2017, Vienna, Austria, tbd, 10.1594/ecr2017/C-2835
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Georgios Stamatakos, Stavroula Giatili:
A Numerical Handling of the Boundary Conditions Imposed by the Skull on an Inhomogeneous DiffusionReaction Model of Glioblastoma Invasion Into the Brain: Clinical Validation Aspects
Cancer Informatics 16, 1 - 16, 10.1177/1176935116684824
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Bhattacharya, P, Bhattacharya, P., Viceconti, M:
Multiscale modeling methods in biomechanics
Wiley Interdiscip Rev Syst Biol Med. 9(3), e1375, DOI: 10.1002/wsbm.1375
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Meier, R, Porz, N; Knecht, U; Loosli, T; Schucht, P; Jürgen Beck, J; Slotboom, J; Wiest, R; Reyes, M:
Automatic estimation of extent of resection and residual tumor volume of patients with glioblastoma
Journal of Neurosurgery January 6, 2017, 1-9, DOI: 10.3171/2016.9.JNS16146
2016
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Iryna Lishchuk:
From personal rights to Intellectual Property Rights
Tagungsband „Junge Wissenschaft –Kolloquium zum Gewerblichen Rechtsschutz, Urheber- und Medienrecht“, tbd
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Garcia, EF:
Use Case II: Imaging Biomarkers and New Trends for Integrated Glioblastoma Management
"Imaging Biomarkers: Development and Clinical Integration" -, 181 - 194, DOI: 10.1007/978-3-319-43504-6_16
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M.E. Oraiopoulou, S. Psycharakis, E. Tzamali, V. Sakkalis, A. Vakis, J. Papamatheakis,G. Zacharakis:
Imaging pathophysiologic parameters of primary Glioblastoma spheroids with light sheet microscopy towards theranostic heuristics
1th annual event of the European Technology Platform on Nanomedicine 11th, annual, tbd, DOI: 10.13140/RG.2.2.32399.38568
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G C Manikis, K. Nikiforaki, N. Papanikolaou, G. Ioannidis, K. Marias:
Addressing Intravoxel Incoherent Motion Challenges Through an Optimized Fitting Framework for Quantification of Perfusion
International Conference on Imaging Systems and Techniques (IST 2016) 5/10/2016, 487 - 492, DOI: 10.1109/IST.2016.7738275
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Eleni Ch. Georgiadi, Nikolaos A. Christodoulou, Christos Kyroudis, Feng Dong, Norbert Graf, and Georgios S. Stamatakos:
Oncosimulator Models as Components of a Personal Health Record Platform can Enable and Enhance the Provision of Personalized Medical Treatment
VPH2016, book of abstracts, University of Amsterdam, 297 - 300 , ISBN 978-90-826254-0-0
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Georgios Stamatakos, Eleni Kolokotroni, Daniel Abler, Eleni Georgiadi, Dimitra Dionysiou, Philippe Buechler,Markos Antonopoulos, Lien Solie, Nikolaos Tousert, Simone Bnà,Debora Testi, Stefaan Van Gool, Rainer Bohle, and Norbert Graf on behalf of the CHIC Consortium :
Important Aspects of the Large Scale Integrating EU-US Project CHIC on Advancing In Silico Oncology
VPH2016, book of abstracts, University of Amsterdam, 319 - 322, ISBN 978-90-826254-0-0
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Eleftherios Ouzounoglou, Eleni Kolokotroni, Martin Stanulla, and Georgios S. Stamatakos:
In Silico Oncology: Evaluating the Predictability of Acute Lymphoblastic Leukemia Patients’ Response to Treatment Utilizing a Multiscale Oncosimulator Model in Conjunction with Machine Learning Methods
VPH2016, book of abstracts, University of Amsterdam, 166 - 169, DOI: 10.13140/RG.2.2.32940.05760
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Eleni Kolokotroni, Dimitra Dionysiou, ChristianVeith, Yoo-Jin Kim, Jörg Sabczynski, Astrid Franz, Aleksandar Grgic, Jan Palm, Rainer M. Bohle, Georgios Stamatakos:
In Silico Oncology: Quantification of the In Vivo Antitumor Efficacy of Cisplatin-Based Doublet Therapy in Non-Small Cell Lung Cancer (NSCLC) through a Multiscale Mechanistic Model
PLOS Computational Biology 12(9), tbd, 10.1371/journal.pcbi.1005093
Additional link
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D. Abler, P. Büchler:
Evaluation of a mechanically-coupled reaction-diffusion model for macroscopic brain tumour growth
The 14th International Symposium Computer Methods in Biomechanics and Biomedical Engineering 2016 2016 14th, annual, tbd
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Iryna Lishchuk:
Patentability Aspects of Computational Cancer Models
14th International Conference of Numerical Analysis and Applied Mathematics, ICNAAM 2016 Proceedings 14th, annual, tbd
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Iryna Lishchuk, Marc Stauch:
Cancer Models as medical support tools
Tagungsband Herbstakademie 2016, 885-900
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James Grogan, B Markelc, AJ Connor, RJ Muschel, JM Pitt-Franices, PK Maini, HM Byrne :
Predicting the influence of microvascular structure on tumour response to radiotherapy
IEEE Transactions on Biomedical Engineering 64(3), 504 - 511, DOI: 10.1109/TBME.2016.2606563
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Nikolaos A. Christodoulou, Nikolaos E. Tousert, Eleni Ch. Georgiadi, Katerina D. Argyri, Fay D. Misichroni and Georgios S. Stamatakos:
A Modular Repository-based Infrastructure for Simulation Model Storage and Execution Support in the Context of In Silico Oncology and In Silico Medicine
Cancer Informatics 15, 219-235, 10.4137/CIn.s40189
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Stura, I:
A simple PSA-based computational approach predicts the timing of cancer relapse in prostatectomized patients
Cancer Research 76(17), 4941 - 4947, DOI: 10.1158/0008-5472.CAN-16-0460
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G. Tzedakis, E. Liapis, E. Tzamali, G. Zacharakis, and V. Sakkalis:
A hybrid discrete-continuous model of in vitro spheroid tumor growth and drug response
38th IEEE-EMBS, Engineering in Medicine and Biology Society (EMBC 2016) 16-20/8/2016, 6142 - 6145, DOI: 10.1109/EMBC.2016.7592130
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Georgios Stamatakos:
The Oncosimulator - Combining Clinically Driven and Clinically Oriented Multiscale Cancer Modeling with Information Technology in the In Silico Oncology Context
International Conference and Exhibition on Pediatric Oncology, Toronto, Ontario, Canada. 11.08.2016-13.08.2016, DOI: 10.4172/2161-0665.C1.023
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G. Stamatakos, Dimitra Dionysiou, Rainer Bohle, Stefaan van Gool, Lien Solie, Feng Dong, Nigel Mcfarlane, Marco Viceconti, Daniele Tartarini, Kostas Marias, Vangelis Sakkalis, Nikolaus Forgo, Iryna Lishchuk, Ravi Radhakrishnan, Alok Ghosh, Helen Byrne, James Grogan, Cat:
Computational Horizons In Cancer (CHIC): Developing Meta- and Hyper-Multiscale Models and Repositories for In Silico Oncology – Strategies, Systems and Results
International Conference and Exhibition on Pediatric Oncology, Toronto, Ontario, Canada. 11.08.2016-13.08.2016, ISBN: 978-618-80348-1-5
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D. Abler, M. Kistler, R. Niklaus, P. Büchler:
CHIC-CDR -- a repository for managing multi-modality clinical data and its application to in-silico oncology
International Conference and Exhibition on Pediatric Oncology, Toronto, Ontario, Canada. 1st, annual, August 12, 2016, tbd, DOI: 10.4172/2161-0665.C1.024
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Georgios Stamatakos:
The Oncosimulator - Combining Clinically Driven and Clinically Oriented Multiscale Cancer Modelling with Information Technology in the In Silico Oncology Context
International Conference and Exhibition on Pediatric Oncology 1st, annual, tbd, DOI: 10.4172/2161-0665.C1.023
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Georgios Stamatakos, D. Dionysiou, R. Bohle, S. Gool, L. Solie, F. Dong, N. Mcfarlane, M. Viceconti, D. Tar-tarini, K. Marias, V. Sakkalis, N. Forgo, I. Lishchuk, R. Radhakrishnan, A. Ghosh, H. Byrne, J. Grogan, C. Guiot, I. Stura, P. Buechler, M. Reyes, E. Neri, A. Bucur, B.:
Computational Horizons In Cancer (CHIC): Developing Meta- and Hyper-Multiscale Models and Repositories for In Silico Oncology – Strategies, Systems and Results
International Conference and Exhibition on Pediatric Oncology 1st, annual, tbd, DOI: 10.4172/2161-0665.C1.024
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K. Marias, K. Nikiforaki, G.C. Manikis, E. Kontopodis, N. Papanikolaou:
Visualizing tumor environment with perfusion and diffusion MRI: Computational challenges
Computer Graphics International (CGI), the 33rd Annual Conference 33th, annual, tbd, DOI: 10.1145/2949035.2949064
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Anca Bucur, Jasper van Leeuwen, Nikolaos Christodoulou, Kamana Sigdel, Katerina Argyri, Norbert Graf and Georgios Stamatakos:
Workflow-driven clinical decision support for personalized oncology
BMC Medical Informatics and Decision Making 16(Suppl 2):87, tbd, 10.1186/s12911-016-0314-3
Additional link
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D. Abler, P. Büchler:
Mechanically coupled Reaction-Diffusion Model of Macroscopic Brain Tumour Growth
ESB 2016 Conference 22nd, tbd
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Viceconti, M, Viceconti, M., Hunter, P:
The Virtual Physiological Human: Ten Years After
Annual Review of Biomedical Engineering 18, 103 - 123, DOI: 10.1146/annurev-bioeng-110915-114742
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Iryna Lishchuk, Marc Stauch:
Multiscale Cancer Modelling in Terms of Copyright
International Journal On Advances in Life Sciences Volume 8 , 65-75
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G.C. Manikis, K. Nikiforaki, N. Papanikolaou, K. Marias:
Diffusion Modelling Tool (DMT) for the analysis of Diffusion Weighted Imaging (DWI) Magnetic Resonance Imaging (MRI) data
Computer Graphics International (CGI), the 33th Annual Conference, tbd
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Kontopodis Eleftherios, Karatzanis, I., Sakkalis, V., Buffa, F., Marias, K:
A DCE-MRI analysis workflow
Computer Graphics International (CGI), the 33rd Annual Conference, June 28-July 01, 2016, tbd, http://dx.doi.org/10.1145/2949035.2949061
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Venianaki Maria, Kontopodis, E., Nikiforaki, K., Eelco, B., Salvetti, O., Marias, K. :
A model-free approach for imaging tumor hypoxia from DCE-MRI data
Computer Graphics International (CGI), the 33rd Annual Conference, June 28-July 01, 2016, tbd
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N. Ramakrishnan, R. W. Tourdot, D.M. Eckmann, P.S.Ayyaswamy, V.M.Muzykantov,R. Radhakrishnan:
Biophysically inspired model for nanocarrier adhesion to live cells: roles of mechanical factors and protein expression
Royal Society Open Science 3:160260, tbd, DOI: 10.1098/rsos.160260
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Dan Freed, J. H. Park, R. Radhakrishnan, M. A. Lemmon:
Deletion mutations keep kinase inhibitors in the loop
Cancer Cell, 423-425, 10.1016/j.ccell.2016.03.017
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Iryna Lishchuk:
Licensing Implications of the Use of Open Source Software in Research Projects
ThinkMind Digital Library, ISSN: 2308-3484, ISBN: 978-1-61208-478-7,, 18-23, ISSN: 2308-3484, ISBN: 978-1-61208-478-7
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Norbert Graf, Georgios Stamatakos:
A multiscale hypermodel to predict the nephroblastoma response to preoperative chemotherapy
9th International Renal Tumor Biology Conference, Toronto, Ontario, Canada 02.04.2016-03.04.2016
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Norbert Graf, G. Stamatakos for the CHIC consortium:
A multiscale hypermodel to predict the nephroblastoma response to preoperative chemo-therapy
9th International Renal Tumour Biology Conference, tbd
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Raphael Meier, Urspeter Knecht, Tina Loosli, Stefan Bauer, Johannes Slotboom, Roland Wiest, Mauricio Reyes:
Clinical Evaluation of a Fully-automatic Segmentation Method for Longitudinal Brain Tumor Volumetry
Nature Scientific Reports 6, -, 10.1038/srep23376
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K. Argyri, D.Dionysiou, F. Misichroni, G.Stamatakos:
Numerical simulation of vascular tumour growth under antiangiogenic treatment: addressing the paradigm of single-agent bevacizumab therapy with the use of experimental data
Biology Direct 11(1), 11:12, DOI 10.1186/s13062-016-0114-9
Additional link
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Elefterios Ouzounoglou, Dimitra Dionysiou, and Georgios Stamatakos:
Differentiation resistance through altered retinoblastoma protein function in acute lymphoblastic leukemia: in silico modeling of the deregulations in the G1/S restriction point pathway.
BMC Systems Biology 10:23 (1), 10:23 (1), DOI: 10.1186/s12918-016-0264-5
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Sabine Müller, Joachim Weickert, Norbert Graf:
Automatic brain tumor segmentation with a fast Mumford-Shah algorithm.
SPIE Medical Imaging 9784, 97842S
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Ilaria Stura, Ezio Venturino, Caterina Guiot:
A two-clones tumor model: Spontaneous growth and response to treatment.
Mathematical Bioscience 271, 19-28, DOI: 10.1016/j.mbs.2015.10.014
2015
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Perracchione, E, Stura, I:
A RBF-PSO Based Approach for Modeling Prostate Cancer
ICNAAM Proceedings September 2015
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Raphael Meier, Venetia Karamitsou, Simon Habegger, Roland Wiest, Mauricio Reyes:
Parameter Learning for CRF-based Tissue Segmentation of Brain Tumors
Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries; series: Lecture Notes inComp uter Science Volume 9556, 156-167, ISBN: 978-3-319-30857-9
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Georgios Tzedakis, Eleftheria Tzamali, Kostas Marias, and Vangelis Sakkalis:
The Importance of Neighborhood Scheme Selection in Agent-based Tumor Growth Modeling
Cancer Informatics 2015; 14(Suppl 4), 67-81, 10.4137/CIN.S19343
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Eleftherios Kontopodis, Georgia Kanli, Georgios C. Manikis, Sofie Van Cauter and Kostas Marias:
Assessing Treatment Response Through Generalized Pharmacokinetic Modeling of DCE-MRI Data
Cancer Informatics 2015:Suppl. 4, 41-51, 10.4137/CIN.S19342
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Markos Antonopoulos, Georgios Stamatakos:
In Silico Neuro-Oncology: Brownian Motion-Based Mathematical Treatment as a Potential Platform for Modeling the Infiltration of Glioma Cells into Normal Brain Tissue.
Cancer Informatics 2015 Aug 10;14(Suppl 4):33-40. eCollection 2015., 33-40, doi: 10.4137/CIN.S19341
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Natesan Ramakrishnan, Ravi Radhakrishnan:
Phenomenology Based Multiscale Models as Tools to Understand Cell Membrane and Organelle Morphologies.
Advances in Planar Lipid Bilayers and Liposomes, 129-175, DOI: 10.1016/bs.adplan.2015.06.004
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Iryna Lishchuk, Marc Stauch:
Copyright in Multiscale Cancer Modeling
INFOCOMP Proceedings INFOCOMP 2015, ISBN: 978-1-61208-416-9, 21 June 2015, Brussels, 117 to 122
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Stefaan Van Gool:
Brain tumor immunotherapy: what have we learned so far?
Frontiers in Oncology 5:98, 1-14, 10.3389/fonc.2015.00098
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Alexandros Roniotis, Mariam-Eleni Oraiopoulou, Eleftheria Tzamali, Eleftherios Kontopodis, Sofie Van Cauter, Vangelis Sakkalis, and Kostas Marias:
A Proposed Paradigm Shift in Initializing Cancer Predictive Models with DCE-MRI Based PK Parameters: A Feasibility Study
Cancer Informatics 2015; 14(Suppl 4), 7-18, 10.4137/CIN.S19339
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Sabine Müller, Ruslan David, Kostas Marias, Norbert Graf:
The Standardized Histogram Shift of T2 Magnetic Resonance Image (MRI) Signal Intensities of Nephroblastoma Does Not Predict Histopathological Diagnostic Information
Supplementary Issue: Computer Simulation, Visualization, and Image Processing of Cancer Data and Processes 14(S4) 1–5, 2015, 10.4137/CIN.S19340
Additional link
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Norbert Graf:
Personalized Medicine and the way to CHIC. A clinical perspective.
Minerva Urol Nefrol 67(Suppl 1), 45
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Nicole Ludwig, Nasenien Nourkami-Tutdibi, Christina Backes, Hans-Peter Lenhof, Norbert Graf, Andreas Keller, Eckart Meese:
Circulating Serum miRNAs as Potential Biomarkers for Nephroblastoma
Pediatric Blood Cancer 2015;62, 1360-1367, 10.1002/pbc.25481
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Iheanyi Nwankwo, Marc Stauch, Alan Dahi, Nikolaus Forgo :
Legal and Ethical Aspects of In Silico Medicine
6th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation, 2014 14934704 , 1-5, doi:10.1109/IARWISOCI.2014.7034647
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Iryna Lishchuk, Marc Stauch, Nikolaus Forgo :
Intellectual Property Rights Issues in Multiscale Cancer Modeling
2014 6 th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation 14934686, 1-5, 10.1109/IARWISOCI.2014.7034646
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Elias Neri, Wouter Dhaeze:
Incorporating Data Protection in In Silico Research: A case of CHIC
2014 6 th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation 14934696, 1-5, 10.1109/IARWISOCI.2014.7034643
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Domenico Gabriele, Francesco Porpiglia, Giovanni Muto, Paolo Gontero, Carlo Terrone, Scipio Annoscia, Donato Randone, Sandro Benvenuti, Giuseppe Arena, Ilaria Stura, Caterina Guiot:
EUREKA-1 database: an epidemiological analysis
Minerva Urologica and Nefrologica Suppl. 1 to No. 1, 9-15
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Domenico Gabriele, Marco Odera, Paolo Gontero, Giovanni Muto, Devis Collura, Scipio Annoscia, Giuseppe Arena, Enrico Bollito, Ilaria Stura, Caterina Guiot, Pietro Gabriele:
Gleason Score and other variables
Minerva Urologica and Nefrologica Suppl. 1 to No. 1, 21-26
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Marco Odera, Domenico Gabriele, Devis Collura, Ilaria Stura, Chiara Fiorito, Francesco Porpiglia, Carlo Terrone, Monica Zacchero, Caterina Guiot, Pietro Gabriele:
The current role of CT and bone scintigraphy in prostate cancer staging
Minerva Urologica and Nefrologica Suppl. 1 to No. 1, 39-42
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Domenico Gabriele, Monica Garibaldi , Anna Maria Marra, Barbara Jereczek-Fossa, Marco Krengli, Maria Tessa, Cristina Bona, Patrizia Ferrazza, Vittoria Balcet, Maria Grazia Ruo Redda, Gregorio Moro, Pietro Gabriele:
Report from the study EUREKA-2 on prostate cancer patients treated by radical radiotherapy: first data analysis
Minerva Urologica and Nefrologica Suppl. 1 to No. 1, 47-55
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Elisabetta Garibaldi, Elena Delmastro, Pietro Gabriele:
Do radiotherapy techniques impact the outcome?
Minerva Urologica and Nefrologica Suppl. 1 to No. 1, 63-75
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Ilaria Stura , Domenico Gabriele, Caterina Stura:
Modeling prostate cancer within CHIC
Minerva Urologica and Nefrologica Suppl. 1 to No. 1, 97-98
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Georgios Stamatakos:
In silico oncology and in silico medicine: from research to clinics and academia.
Minerva Urologica e Nefrologica 67 (Suppl. 1 to No 1), 43-44
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Georgios Stamatakos:
A brief outline of the CHIC project
Minerva Urologica e Nefrologica 67 (Suppl. 1 to No 1), 5-6
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Viceconti, M., Viceconti, M., Hunter, P., Hose, R:
Big Data, Big Knowledge: Big Data for Personalized Healthcare
IEEE J Biomed Health Inform 19(4), 1209-15 19(4), 1209-2015, DOI: 10.1109/JBHI.2015.2406883
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Viceconti, M:
Biomechanics-based in silico medicine: The manifesto of a new science
J Biomech 48(2), 193-194
2014
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Farhad Rikhtegar, Eleni Kolokotroni, Georgios Stamatakos,Philippe Buchler:
A Model of Tumor Growth Coupling a Cellular Biomodel with Biomechanical Simulations
In Silico Oncology and Cancer Investigation (IARWISOCI), 2014 6th International Advanced Research Workshop on 2014, 1-4, 10.1109/IARWISOCI.2014.7034638
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Ilaria Stura, Domenico Gabriele, Caterina Guiot:
A two population Model of Cancer growth with fixed Carrying capacity
Proc. 2014 6th Int. Adv. Res. Workshop on In Silico Oncology and Cancer Investigation – The CHIC Project Workshop ( IARWISOCI) 1414969200, 35-38
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Georgios Stamatakos, Dimitra Dionysiou, Fay Misichroni, Norbert Graf, Stefaan van Gool, Rainer Bohle, Feng Dong, Marco Viceconti, Kostas Marias, Vangelis Sakkalis, Nikolaus Forgo, Ravi Radhakrishnan, Helen Byrne, Caterina Guiot, Philippe Buechler, Elias Neri, Anca Bucur, Bern:
Computational Horizons In Cancer (CHIC): Developing Meta- and Hyper-Multiscale Models and Repositories for In Silico Oncology - a Brief Technical Outline of the Project
Proc. 2014 6th Int. Adv. Res. Workshop on In Silico Oncology and Cancer Investigation - The CHIC Project Workshop (IARWISOCI), Athens, Greece, Nov.3-4, 2014, 9 - 13, ISBN: 978-618-80348-1-5
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Ravi Radhakrishnan,, Richard Tourdot, Ryan Bradley, Natesan Ramakrishnan:
Multiscale Computational Models in Physical Systems Biology of Intracellular Trafficking
IET Systems Biology 8, 198-213, doi:10.1049/iet-syb.2013.0057
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Raphael Meier, Stefan Bauer, Johannes Slotboom, Roland Wiest, Mauricio Reyes:
Patient-Specific Semi-Supervised Learning for Postoperative Brain Tumor Segmentation
Med Image Comput Comput Assist Interv 17, 714-21, http://www.ncbi.nlm.nih.gov/pubmed/25333182
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Stura I, Guiot C:
A Generalized Model of Tumor Growth and Response to Treatment using the PUN approach
VPH Conference Abstracts 1410213600, 1 (e-poster)
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Ilaria Stura:
A Two-Clones Model of Tumor Growth and Its Response to Treatment
MPDE'14 abstracts August 2014, 1
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Ravi Radhakrishnan, Richard Tourdot, Natesan Ramakrishnan:
Defining the Free Energy Landscape of Curvature Inducing Proteins on Membrane Bilayers
Physical Review E Vol. 90, Iss. 2, doi:10.1103/PhysRevE.90.022717
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Coveney, P., Coveney, P., Diaz, V., Hunter, P., Viceconti, M:
Computational Biomedicine
- 2014, tbd, ISBN: 978-0199658183
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GABRIELE P, RUO REDDA MG, GARIBALDI M, GABRIELE D, CATTARI G, GARIBALDI E, GUIOT C:
A multicenter retrospective study on irradiated prostate cancer: preliminary report
Anticancer Research 34, 2632-2633
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Domenico Gabriele, Paolo Gontero, Carlo Terrone, Francesco Porpiglia, Giovanni Muto, Caterina Guiot:
Piedmont multicenter retrospective study on operated prostate cancer: first report
Anticancer Research 34, 2633-2634
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Georgios Stamatakos, Dimitra Dionysiou, Aran Lunzer, Robert Belleman, Eleni Kolokotroni, EleniGeorgiadi, Marius Erdt, Juliusz Pukacki, Stefan Rueping, Stavroula Giatili, Alberto Donofrio, Stelios Sfakianakis, Kostas Marias, Christine Desmedt, Manolis Tsiknakis, Norbert Graf:
The Technologically Integrated Oncosimulator: combining multiscale cancer modelling with information technology in the in silico oncology context
IEEE J. Biomed Health Inform. 18/3, 840-854, 10.1109/JBHI.2013.2284276
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Yingting Liu, Ravi Radhakrishnan:
Computational Delineation of Tyrosyl-Substrate Recognition and Catalytic Landscapes by the Epidermal Growth Factor Receptor Tyrosine Kinase Domain
Molecular Biosystems 10/7, 1890-1904, doi:10.1039/C3MB70620F
Additional link
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Natesan Ramakrishnan, Sunil Kumar, Ravi Radhakrishnan:
Mesoscale computational studies of membrane bilayer remodeling by curvature-inducing proteins.
Physics Reports 543, 1, 1-85, doi:10.1016/j.physrep.2014.05.001
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Domenico Gabriele, Devis Collura, Marco Odera, Chiara Fiorito, Francesco Porpiglia, Carlo Terrone, Monica Zacchero, Caterina Guiot, Pietro Gabriele:
Is there still a role for computed tomography and bone scintigraphy in prostate cancer staging? An analysis from the Eureka-1 database
World Journal of Urology 34/4, 517-523, 10.1007/s00345-015-1669-2
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Joost Dejaegher, Stefaan Van Gool, Steven De Vleeschouwer:
Dendritic cell vaccination for glioblastoma multiforme: review with focus on predictive factors for treatment response
Immuno Targets and Therapy 2014:3, 55-66, doi:10.2147/ITT.S40121
Additional link
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Olaf Wolkenhauer, Charles Auffray, Olivier Brass, Jean Clairambault, Andreas Deutsch, Dirk Drasdo, Francesco Gervasio, Luigi Preziosi, Philip Maini, Anna Marciniak-Czochra, Christina Kossow, Lars Kuepfer, Katja Rateitschak, Ignacio Ramis-Conde, Benjamin Ribba, Andreas Schu:
Enabling multiscale modeling in systems medicine
Genome Medicine Vol. 6, Iss. 21, doi:10.1186/gm538
2013
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Ravi Radhakrishnan, Daniel Weiser, Scott Bressler, Peter Huwe, Ravi Radhakrishnan, Mark Lemmon, Yael Mosse:
Integrative functional assessment of ALK mutations for therapeutic stratification in neuroblastoma
Cancer Cell 26, 682-694, doi:10.1016/j.ccell.2014.09.019
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Michael Kistler, Serena Bonaretti, Marcel Pfahrer, Roman Niklaus, Philippe Büchler :
The Virtual Skeleton Database - An open access repository for biomedical research and collaboration
Journal of Medical Internet Research 15 (11), e245, doi:10.2196/jmir.2930
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Shannon Telesco, Rajanikanth Vadigepalli, Ravi Radhakrishnan:
Molecular modeling of ErbB4/HER4 kinase in the context of the HER4 signaling network helps rationalize the effects of clinically identified HER4 somatic mutations on the cell phenotype
Biotechnology Journal 8, 1452-1464, doi:10.1002/biot.201300022
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Raphael Meier, Stegan Bauer, Johannes Slotboom, Roland Wiest, Mauricio Reyes:
A Hybrid Model for Multimodal Brain Tumor Segmentation
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Georgios Stamatakos, Norbert Graf, Ravi Radhakrishnan:
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Georgios Stamatakos, Kolokotroni E, Dionysiou D, Veith C, Kim YJ, Franz A, Marias K, Sabczynski J, Bohle R, Graf N.:
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Bernard de Bono, Pierre Grenon, Richard Baldock, Peter Hunter:
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Peter Huwe, Ravi Radhakrishnan:
Computational Methodology for Mechanistic Profiling of Kinase Domain Mutations in Cancers
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